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Uncovering Novel Genomes from Earth’s Microbiomes
… now available and  described November 9, 2020 in  Nature Biotechnology . Known as the GEM (Genomes from Earth’s … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Path for Metagenomics Researchers Building upon these resources, KBase, a multi-institutional collaborative knowledge …
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JGI@25: The Little Alga That Could
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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New Research Sheds Light on Diversity in the Deep Sea
… deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the … other biomolecules that could potentially be applied to biotechnology and medicine. A more robust understanding of … (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding of the unique …
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John Vogel
… driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … (e.g. sequenced mutant collections, transformation technology, epigenetic analysis techniques) and utilizing …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi have genes that can break … . To map microbial activity, Baldrian’s team distinguished four specific habitats within the forest floor: the leaf …
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JGI Interns at UC Merced Earn CAMP Merit Awards
DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC … (NSF) and supports underrepresented minorities in science, technology, engineering and math (STEM) fields. At the 2016 … Mentor: Dr. Arnold Kim)   “It is a beautiful thing, that our young campus earned 25% of the research awards,” said …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Jane Grimwood Named HudsonAlpha Genomics Chair
Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm mayor of … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor of  DOE’s Center for … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker …
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Integrating Experimentation with Data
Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated … for more details and registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… process. The isotope labeling incubations can take hours to months, followed by weeks of tricky, laborious lab … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … improving data collection, analysis and reporting.  Thirty-four attendees came together for the workshop, including …
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