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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and ecosystems. These curated data are accessible on JGI data portals including the Integrated Microbial Genomes …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Gotta Catch 'Em Gall
… how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… it would be like a human encountering another human as tall as Mount Everest,” said Jean-Marie Volland, a scientist … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism, it does chemosynthesis, which is a process analogous to photosynthesis for plants.” Another outstanding …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through … reinforced by the  Fort Lauderdale Agreement (2003), the JGI recognized the need to engage the community to inform necessary changes to JGI data policies. Since completion of the HGP, the JGI has …
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How Filamentous Fungi Sense Food
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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Finding the Fermenters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace … in Walnut Creek. The students’ research culminated in presentations on their work delivered during the 5th … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete a …
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