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Micro-Scale Applications Group
… information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA … additional functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate …
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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … viruses,” said the study’s lead author Simon Roux, a JGI research scientist in the  Environmental Genomics group … and extrusion, and DNA replication and integration. The researchers also learned how an inovirus’ strategy of …
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I-Min (Amy) Chen
… currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and …
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … produced in engineered viruses or microbial cells. Researchers could then use these proteins to recognize … Canada, and Compute Canada and the Canada Foundation for Innovation through grants awarded to S.J.H., R.J.G. and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… provides new views of these relationships.  Recently , researchers used population genomics to find that while … more about how archaeal hosts and hitchhikers coexist, researchers studied the host  Ca . Altiarchaeum and its … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Viruses Reprogram Cells into Different Virocells
… or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project. For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… looking at how communities of these microalgae interact, researchers have found that polar algae rely on dissolved … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this …
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The More the Merrier: Making the Case for Plant Pan-genomes
… traits. Given the importance of polyploidy in plants, researchers have sought to learn the origins, evolution and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  Brachypodium  grasses have …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and comprehensive database … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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A One-Stop Shop for Analyzing Algal Genomes
… complex and difficult to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, …
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