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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … (SMC) has launched as an interactive public database for the research community. With more than 13 million BGCs … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … arise when different ancestral species crossbreed before genome doubling. In allopolyploids, the set of … a subgenome. Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to …
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T)
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Genome-wide functional screens enable the prediction of high activity CRISPR-Cas9 and -Cas12a guides in Yarrowia lipolytica
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Finding the Fermenters
… the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … bioproducts. Summary Researchers at the University of California, Davis and UC Santa Barbara generated a list of … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on …
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High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … Genomes Project, which aims to provide a reference genome for each of the fungal families. Researchers had access to … genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The data allowed the team to …
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Katherine Louie
… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product …
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