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… lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … Clum, A. et al. (2021)  DOE JGI metagenome workflow …

… diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes … explained. “That is definitely material that the scientific community now can use further. Let’s say somebody …

… of the microbial communities in the environmental samples without needing to isolate individual organisms, using … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode … work also used resources of the  National Energy Research Scientific Computing Center (NERSC) , another DOE Office of …

… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … April 2024 — through serving an increased number of users with a record output of products, making data easier to … 11% of the five-year milestones. … Highlights arising from scientific collaborations with our users over the last year …

… monitoring of this use by system or security personnel. … With respect to documents available from this server, … Accordingly, the U.S. Government retains a nonexclusive, royalty-free license to publish or reproduce … any statement of authorship are reproduced on all copies. JGI is not responsible for the contents of any off-site …

… an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …

Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts …

… features prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, … being conducted through the  Belowground Biogeochemistry Scientific Focus Area (SFA), supported by the Terrestrial … the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming …

… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and … genome portal reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many components that make it useful for scientific inquiry: it shows a full phylogenetic tree of …