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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las … genomic coverage. Experts in cultivation and environmental genomics will work together to develop recommendations for … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel microbial …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited … Kyrpides , Biology & Biochemistry category Computational Genomics Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have … Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome … microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … river microbiome datasets are also available through the DOE Systems Biology Knowledgebase, allowing researchers to … Science Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number … needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, has been developing and applying new genomics capabilities that address these issues. Check the …
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Disclaimer
NOTICE Information from this server resides on a computer system funded by the U.S. Department of … by trade name, trademark, manufacturer, or otherwise, does not necessarily constitute or imply its endorsement, …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have … in carbon fixation in the dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial … Woyke and her colleagues harnessed the JGI’s single cell genomics capabilities to assemble, identify, and …
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