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Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying … that support user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via … mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical compound …
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Forming Scientific Connections and Building Community
… on their summer projects. Watch the short video here to see what they had to say about their experiences and what … that I’d never done before from my mentors. Also, there’s always a better way to do something.” Mentors Daniela Cassol, Jeff Froula & …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each … Being able to do this was beneficial to her in multiple ways. “At Berkeley Lab, we have an established set of core … become like you.’ And so here I am, living that dream from way long ago.”                     Byline: Graham Rutherford …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, … including understanding enzymatic transformations, pathways, and how changes in metabolism can affect ecosystem …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called Multiple … capability that is desirable in the microbiome field due to its high recovery of single-cell genomes. This is key to …
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JGI@25: Using Team Science to Build Communities Around Data
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to create two reference … Schmutz explained. “…They provide a more straightforward way to connect genes and infer changes in gene function …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
… reader, you’re reading this because either you are serendipitously here by accident or else are interested in …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, accessing these untapped metabolic …
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Integrating Experimentation with Data
… (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with Data.” The event …
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FICUS
… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline … the demonstration of a technology that would be applicable to DOE mission is appropriate. For accepted proposals, …
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