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Microscopic Algae as New Emerging Models for Studies of Organic Biocrystallization and Vision
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … address some of the most pressing challenges of our time. For more information, please visit  …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated … strides in generating genome sequences for members of the microbial world through bulk community sequencing … detailed in the journal  Microbiome , combines multiple techniques and was demonstrated using a specific group of …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their … model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston of Oak …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … the Energy Sciences Network (ESnet) have been recognized for outstanding achievements in science, technology, and … that will enable scientists to explore and collect data in new ways,” she said. “We’re excited to be able to offer this …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics … DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – has advanced their work on the … a quantitative lens. This led to the development of a technique called quantitative Stable Isotope Probing, or …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in … The UEC represents the JGI user community and is responsible for providing input and advice on JGI …
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High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … a team of researchers has been working on improving methods for isolating and characterizing entire microbial genomes … and interactions. Supported by JGI’s ETOP, this new tool will now be available for JGI users interested in …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE … Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … developing an algorithm for RNA-Seq assembly. RNA-Seq is a technique for profiling the small fraction of a genome that …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … research activity is focused on developing and implementing new technologies and methodologies that facilitate discovery … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, …
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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