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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… transcriptomics studies to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better …
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Ian Blaby
… where he leads three groups focused on HTP DNA design and assembly, strain engineering and bioinformatic tool … in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for … stress transcriptomes. The Plant Journal . 84: 5, 974-988. 2015 Zones et. al., High-resolution profiling of a …
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Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach
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Marine Microbe Contains Multitudes
Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted to … Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long … User Facility, is supported under contract number DE-AC02-05CH11231. This work is a contribution of the Simons …
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Sequencing Technologies
… next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the …
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CoverM: Read alignment statistics for metagenomics.
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Scientific Advisory Committee
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Next generation sequencing data of a defined microbial mock community
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include … Nanomaterials (CFN) at Brookhaven National Laboratory in 2015 Served on the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley …
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Ben Bowen
… and bioinformatics facilitates impactful scientific discoveries, supporting the DOE’s Biological and Environmental … State University, Bioengineering & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D … U., Cadillo-Quiroz, H., Garcia-Pichel, F., & others (2015). Exometabolite niche partitioning among sympatric soil …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. … UK and Lawrence Berkeley National Lab … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation …
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