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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … of the genome , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Lavenstein Bendall and mentor Juan C. Villada, Ecology & Evolution of Self-Catalytic Introns across Earth’s …
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David Goodstein
With a background in experimental and computational surface … focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … 72, 411. Gordon et al., 2020.  Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected … the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … the new organelles named pepins played a role in the evolution of the Thiomargarita magnifica extreme size, and …
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Jeremy Schmutz
… involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human … human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres. Nature 492: 423-427. …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … Cell . 25: 11, 4305-4323. 2013 Blaby et. al., Experimental evolution of a facultative thermophile from a mesophilic …
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Emiley Eloe-Fadrosh
… the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Member, Duke University (2018-2020) Section Head, Microbial Evolution & Genomics, F1000Prime Reviewer for major journals …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … from this review, I can say that a key area for the JGI’s evolution is in how we manage our data and how we can make …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP allows researchers …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … founded in 2014 with the goal of inspiring students to embark on a career in genomics and to help foster a diverse … Phages … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria Internship … Cross Species …
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