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JGI announces 2023 CSP Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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Understanding Wildfire Recovery, Starting in Soil
… a multi-institutional team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming … one DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA … was performed at the University of Colorado Cancer Center’s Genomics Shared Resource, which is supported by the Cancer …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers may often … Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  in …
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JGI announces final round of 2022 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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Alpha‐ and beta‐mannan utilization by marine Bacteroidetes
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Help from Citrus’ Bitter, Hardier Cousin
Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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David Goodstein
… group also develops and maintains the Phytozome Plant Genomics web portal. … BS in Physics, New York University, … extensive structural mutation in the laboratory. The Plant Cell 35 (2), 644-672 A Sreedasyam et al., 2023. JGI Plant … genomes.  eLife 11, e78526. Li et al., 2021.  Plant Pan-Genomics Comes of Age . Annual Review of Plant Biology 72, …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… in, on and around the planet–through techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 …
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Protocols
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Tanja Woyke Elected to American Academy of Microbiology
Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells group. She has also served as the Functional Genomics …
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An Automated Tool for Assessing Virus Data Quality
… are being recovered and identified from environmental samples (metagenomes). However, the quality and completeness … who encounter an elephant for the first time. Based on the single body part each blind man touches – a tusk, the ear, … of uncultivated viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the …
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JGI@25: Using Team Science to Build Communities Around Data
… for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … another 100 genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. … along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is to generate …
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