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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity for researchers to request the capabilities and expertise of … The program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries … at the JGI and the other participating facilities, is then forwarded to DOE for final approval. Following DOE approval, …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! … highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 … of a team that  released a reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire … address some of the most pressing challenges of our time. For more information, please visit  …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and … led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with … the Cas14 proteins identified were found within the archaeal superphylum DPANN, named by a JGI-led team for the …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies sediment-dwelling archaea, expressed his interest in giving a voice to JGI …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of … Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … senior authors. “It offers us the possibility to explore genomically the whole complex of progenitors and descendant …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between … successfully automated aspects of a commonly-used process for studying microbial communities, with results published … a wide variety of microbes, including both bacteria and archaea, actively engaging with the fungi — highlighting the …
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A synthesis of bacterial and archaeal phenotypic trait data
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