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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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Help from Citrus’ Bitter, Hardier Cousin
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study … yet sweet are its genetic secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze … data. (Data from the project are available on the  JGI Genome Portal .) The team has also been able to discover …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay the foundation for her graduate work. “Being a JGI-UC Merced Intern during the summer of my first year as a …
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Finding the Fermenters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, …
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How Filamentous Fungi Sense Food
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 150 archaeal viruses had been previously identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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VEGA Symposium
Hosted by the JGI and co-organized with NIST,  the goal of the Viral … Libusha Kelly , Albert Einstein College of Medicine JGI Organizers Simon Roux, Jonelle Basso, Maureen Berg, …
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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
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Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010
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