The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
Primer and platform effects on 16S rRNA tag sequencing
DOE JGI Metagenome Workflow
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
JGI Portals
Publications
MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
JGI Workshop at 2025 Aquatic Sciences Meeting
