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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … on Alaska’s glacially dominated Copper River Delta. They’re looking at how the microbes in these high latitude wetlands, …
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Environmental Genomics Group
… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science … scientific questions relevant to the DOE mission, and we look forward to facilitating their success. “ The CSP Annual …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the … feeds into a better understanding of nutrient cycling across the planet. Summary To understand more about how …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … to define the current shape of the microbial tree of life by filling in genomic information for thousands of …
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Dan Rokhsar
Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational … directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … the origin, evolution, and diversity of plants and animals by combining computational genome analysis, sequence-based …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … of viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … cycles. “This is the first study to take a more global look at giant viruses by capturing genomes of uncultivated …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in … questions about structure and function,” Blaby-Haas said.  Looking at blueprints in high-throughput This work builds on …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … over 500,000 existing genomes available at that time. “Looking across the tree of life, it’s striking how many …
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2021 Progress Report
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