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Supercharging SIP in the Fungal Hyphosphere
… method to the study of a particular fungi, researchers identified novel interactions between bacteria and the fungi. … can be broken down for things like biomass and  biofuels . However, AMF and the microbial communities they … into the DNA of specific microbes who consume the labeled food or water. Later, their DNA can be tested for the …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… trying to bring in a lot more people who want to do it but just otherwise couldn't or wouldn't,” said Rex Malmstrom, … researcher and JGI user Roli Wilhelm set out to do a SIP-fueled meta-analysis with a member of his lab, Abigayle … will help grow and improve high-quality datasets, enabling global insights from modeling, machine learning, and …
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Uri Neri
… others that RNA viruses are actually interesting and not just "spicy messenger RNA", and that somewhere in the mess …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their derivatives during her … 2020. Giant virus diversity and host interactions through global metagenomics. Nature 578, 432-436. Bowers et al. … of bacterial and archaeal isolates expand coverage of the tree of life. Nature Biotechnology 35, 676-683. Schulz et …
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Jeremy Schmutz
DOE relevant cellulosic feedstocks. Schmutz provides scientific project management for the reference eukaryotic … IL … Healey, A.L., Garsmeur, O., Lovell, J.T. et al.  2024.The complex polyploid genome architecture of sugarcane. … across the plant kingdom. Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate …
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From Competition to Cooperation
… from the French National Institute for Agriculture, Food and Environment (INRAE), Hungary’s Biological Research … Development Fund and the Plant-Microbe Interfaces Scientific Focus Area in the Genomic Science Program, the Office …
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Chapter Seven Phylogenetics and Phylogenomics of Rust Fungi
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JGI Announces 2023 Community Science Program Awardees
… these PIs will address a broad diversity of important scientific questions relevant to the DOE mission, and we look … Environmental Research (BER) missions in: sustainable biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry. You …
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Tanja Woyke Elected to American Academy of Microbiology
… process for AAM Fellows is based on their records of scientific achievement and original contributions that have … a 2014 Berkeley Lab Director’s Award for Exceptional Scientific Achievement , and was among the Lab’s 2015 Women @ the … offering the opportunity to refine the phylogenetic tree of giant viruses and revealing metabolic reprogramming …
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Meeting Code of Conduct
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M … Dent : The best part of being a JGI intern has been just the accessibility to an abundance of knowledge. There’s … And there’s been so many chances for me to grow and just learn. And being a JGI intern means not only just …
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Nikos Kyrpides
… et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat … Reveal Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson …
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