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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… research (see his  2021 VEGA talk ). A global authority on viruses, Holmes was part of  the initial release the genome … has also yielded insights into the origin and spread of viruses like dengue, Ebola, hepatitis C, HIV, influenza, … what is called the “virus field,” or the totality of viruses in the universe. He pointed to significant gaps in …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert to form the foundation of this deep Earth ecosystem. For example, when certain viruses attack, their archaeal hosts release organic carbon. … that CRISPR-Cas systems target infectious agents like viruses and plasmids. First,  Ca . Altiarchaeum had …
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Tanja Woyke Elected to American Academy of Microbiology
… reconstructed more than 2,000 genomes of large and giant viruses belonging to the nucleocytoplasmic large DNA viruses (NCLDV) supergroup. As a result, the giant virus … the opportunity to refine the phylogenetic tree of giant viruses and revealing metabolic reprogramming as common …
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Introducing New Members of the JGI User Executive Committee
… [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … and large-scale data analysis to better characterize how viruses infect soil microbes and influence how soil …
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Natural Prodcast Episode 14: Nigel Mouncey
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Ancient Algae Reveal Secrets of Plant Evolution
… and by the German Research Foundation grant 440231723 (VR 132/4-1) to J.d.V., TH417/12-1 to G.T. and F.R., and …
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DOE JGI Interns Share Their Summer Experiences
… Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean …
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IMG/M: a data management and analysis system for metagenomes
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… and can grow with or without light. The relatively small size of its genome also simplifies metabolic modeling and … of critical minerals. Due to its ability to photosynthesize, it can function as a self-sufficient biotechnology. …
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Multispectrum ModiFinder Site Localization Performance
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Computationally Classifying Fungal Lifestyles
… over 100  Dothideomycetes genomes, just enough of a sample size to test if a computer algorithm could distinguish …
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