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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in …
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Genetics of mating in members of the Chaetomiaceae as revealed by experimental and genomic characterization of reproduction in Myceliophthora heterothallica
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop … moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the … and at HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the …
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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High-resolution phylogenetic microbial community profiling
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Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an interactive and comprehensive … including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … They also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used …
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Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10T)
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The Power of One, Amplified
… mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, … This work was also sponsored by NSF grants DEB-1441717, OCE-1335810, and OIA-1826734 to RS. …
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock switchgrass … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … This means it contains more than two copies of the genome , which can have pronounced ecological and …
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I-Min (Amy) Chen
… for the data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key components …
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