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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass spectrometry for … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
The team worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … which allows researchers to integrate the expertise and capabilities of more than one DOE Office of Science National …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part … interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and …
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Viruses Reprogram Cells into Different Virocells
… science initiative between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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The Case for Conservation
The genome assemblies highlight the multiple advances in sequencing technologies applied to the effort. The Impact … to evolve so rapidly in gene content and structure. He and JGI Plant Program head Jeremy Schmutz already see how … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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How to Target a Microbial Needle within a Community Haystack
… for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other … areas that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles …
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Eelgrass Proves to Be Much Younger Than We Thought
The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … duplication event — bioinformatics expertise, as well as sequencing for all global populations of eelgrass used in … in Atlantic Ocean environments and the plant’s carbon sink capabilities.  … This study was supported by a PhD …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … and inorganic compounds. Studying their diverse metabolic capabilities offer insights into how microbial processes …
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JGIota: Looking Back at Sequencing for Soybeans
… a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a …
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