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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … our collaborations and capabilities to enable great science that will help solve energy and environmental … directly from samples sidesteps these challenges, since it doesn’t require this kind of lab culture. Beginning in the …
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Deeplasmid: deep learning accurately separates plasmids from bacterial chromosomes
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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JGI Announces 2025 New Investigator Portfolio
… (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have … The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … a widening circle of researchers whose work aligns with DOE missions .  Below find a list of researchers whose …
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The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa
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Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina
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Tracking the Origins of Methane-Producing Microbes
… published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is … in our immediate microbiome. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following … written by M. Wayne Davis or commercial options include SnapGene . … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and … students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 …
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Early evolution of the LIM homeobox gene family
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