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JGI@25: From Life at the Extremes to Editing Genomes
… past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the … of Earth and Planetary Science and Environmental Science, Policy, and Management.” So begins a passage from Doudna’s book about …
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Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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Connecting metabolome and phenotype: recent advances in functional metabolomics tools for the identification of bioactive natural products
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MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Mapping the Earth’s Hidden Fungal Kingdom
… Berkeley National Laboratory (Berkeley Lab). “These data can also be used for machine learning and artificial … capture the vast nature of fungal diversity. Examining databases like MycoCosm , the JGI’s online fungal genomics … artificial intelligence to genomics. The comparative datasets that revealed evolutionary patterns are now …
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Three Join the JGI User Executive Committee
… Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … will help the JGI shape its programs, capabilities, and resources to best meet the broad base of user community … for providing input and advice on JGI policies and practices that affect users and their access to technical …
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Virocell resource manipulation under nutrient limitation.
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PEATmoss (Physcomitrella Expression Atlas Tool): a unified gene expression atlas for the model plant Physcomitrella patens
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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Picking Up Threads of Cotton Genomics
… D are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … and increasing the efficacy with which we use natural resources for provisioning society.”   Genome-wide gene … Cotton on Phytozome Data Portal …
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