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… Trained on environmental data, a new JGI tool more accurately … long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  now available to the … Berkeley National Laboratory (Berkeley Lab), led the project. He explained that large language models—artificial …

… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … (IMG/M) suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV identified a total of 44,652 complete …

… By characterizing the structure and function of a methylthio-alkane … their surroundings. Case in point: for us, the smell of the ocean simply signals we’re near the beach. For bacteria, … way from sequencing to functional characterization, and a project like this — an exciting project — we were able to …

… Sequencing technology has changed dramatically over the last  … For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research … surveys could lead to better predictive models of global climate. They may also provide a basic understanding of the …

… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently approved through the JGI …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … huxleyi, a microeukaryote, forms large algal blooms in the ocean that cycle environmental carbon and sulfur. A giant … vast amounts of calcite and nutrients back into the ocean. Because other giant viruses live globally and infect …

… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … and support all kinds of plants and animals, but with climate change driving more extreme wildfires, more and more … DOE Office of Science National User Facilities in a single project. …

… and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive experience shaping compelling narratives for diverse audiences. In her prior role as a … Click to see the coverage of JGI-enabled science highlighting user research, newly accepted proposals, and outreach …

… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …

… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating … along multiple avenues, including agriculture, climate modeling, novel bioproducts, and environmental …

… JGI innovates protocol revealing how genetic variations in … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that … factors bind in the genome. A key aspect of the project is understanding what TFs and regulatory networks …

… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … And a little after that acquisition, I moved to another project. This time on vitamin C with a Gluconibacter .  And … to looking at pathways, and to looking at the interactions of organisms and environments.  DAN: Where do you …