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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … speaker at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting, to be held in …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and … in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … using HMM profiles of protein domains from the pfam database to test the efficacy of a particular kind of deep …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search for and …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … user facility. The staff and resources shifted to offering genomic science capabilities for energy and environmental …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He received his Ph.D. … as a research scientist on projects to develop functional genomic technologies and to understand genome function in …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, …
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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the bioenergy and …
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