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DAP-seq Drives Robust Mapping of Gene Regulation
… deciphering the complex wiring behind a city’s power grid. Just as the flow of electricity controls when and where … from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, … Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Benjamin Cole
… Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light … day. At the Joint Genome Institute, Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic components required for effective …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two … produced by living organisms. The collaboration between the JGI and the Foundry on this project highlights an  ongoing … can synthesize other bio-based materials. For information about licensing the patented osteoyeast for hydroxyapatite …
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Picking Up Threads of Cotton Genomics
… of the five major lineages of cotton;  G. tomentosum ,  G. mustelinum , and  G. darwinii are the others. All of these … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … is one such example.” Jones noted that he talks to growers about Cotton Inc.’s long-term investment in crop research. …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an …
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A Complex Confection Decoded: Sugarcane Reference Genome
… in  Nature by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The … Pennacchio , Project Management Office. For questions about the appropriateness of projects or experimental …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI … practice ideas presented in a  Trends in Biotechnology  review piece by Yoshikuni and JGI colleagues Jing Ke and …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread …
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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … contexts.  “That allows us now to really start thinking about the structure-function relationship. What could we do, …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production …
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