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Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean …
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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain … near this tree and so there was probably some historical evolutionary event where the DNA transferred from the fungus …
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… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … cycles, as well as atmospheric particle formation and evolution. Data from such studies is expected to advance a …
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… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The 1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team … The Integrated Microbial Genomes group is focused on: Developing state-of-the-art … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …
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The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … design tool … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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… (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types …
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… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …
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… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …
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