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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your …
Learn more
Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It … Embargo : A period in which data is not publicly available in JGI systems or … is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often referred to as …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. … and technologies to analyze metabolites in environmental organisms, communities, and samples including …
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Natural Prodcast Episode 18: A CSP Primer
… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these … sequenced, or whatever the  equivalent is for more complex organisms, or hundreds of kb synthesized, and so on The …
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Natural Prodcast Episode 2: The Primer, Part 2
… more about microbiomes and symbionts that live with other organisms, and often it’s the bacteria, or whatever, that … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … Plant microbiomes hold the amazing ability to influence plant development, fitness and … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … Utah– is looking at the natural product potential of microorganisms from Great Salt Lake, which is a hypersaline … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … references dozens of iconic JGI contributions to advancing the frontiers of environmental and energy genomics. The …
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Natural Prodcast Episode 16: Marcy Balunas
… does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … And that’s really exciting to think about looking at desert organisms. There’s the group that looks at the Antarctic and … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …
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