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Natural Prodcast Episode 21: Elizabeth Parkinson
The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must have the legal authority to commit your institution or organization to the terms and …
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New Lineages of Life Group
… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … of Utah , about her secondary metabolism research on novel microbes and bioactive compounds in the Great Salt Lake. …
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Natural Prodcast Episode 12: Nadine Ziemert
… product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission … successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on … for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to …
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Publication Policy
… result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Natural Prodcast Episode 14: Nigel Mouncey
… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … But they really span our core science programs which are microbes, and fungi, and algae plants, synthetic biology. …
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Natural Prodcast Episode 11: Marnix Medema
… about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean … a nice example of going from a whole community with many microbes, hundreds of gene clusters, and then being able to …
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