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… does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … and so we were able to actually not dive to collect the marine tunicates, which was nice because it’s also cold. And … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing …

… culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … on plant natural products. Rich, rich in bacterial and marine stuff. So we need more people annotating. It will …

… of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric genomic science user facility … through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …

… We focus our efforts on integrating database mining and sequence design with scaling the production of large, … such as those involving biosynthetic clusters, or high complexity combinatorial libraries.  We have developed … on developing methods for converting digital information from sequence databases into biotechnological or …

… terrestrial biogeochemical processes, development of high performance plants and microbes, and understanding … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — … with genomics, transcriptomics, imaging, and other data from EcoFAB systems can provide novel insights into the …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of … potential applications. By recovering population genomes from metagenomes, we gain insights into microbial …

… in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways …

… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … Researchers also study ways to develop valuable byproducts from lignin left over after biomass processing. Great Lakes …

… Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. … Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… and bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial … and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for uncultivated … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

… is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …