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… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential of uncultivated lineages …

… achieving a predictive understanding of complex biological, earth, and environmental systems for energy and … Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data …

… A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… over our interview with Dr Elizabeth (or Betsy) Parkinson from Purdue University. She’s in the Department of Chemistry … in is actually seeing whether we could go into the genomes and predict what the natural product might actually … BETSY PARKINSON: Yeah. DAN: Are you familiar with Tiny Earth? BETSY PARKINSON: I am familiar with Tiny Earth, yeah. …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … direct applications in bioenergy production, carbon management, and environmental sustainability. Fungi, with … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …

… for amplifying the JGI’s impact. Data generated from a single investment will be reused for further … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting … they deserve. They are so exciting. I get frustrated. Like microbiomes  – you know how that’s a big deal now. You go to …   DAN: Got it.    NANCY: And this is really to complete the genomes, and I’m really thankful for this. It sort of goes …

… DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and genome-centric …

… is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of … often use primary metabolites as building blocks to produce novel molecules. And so we’ve got glycosides being made into …

… JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions … among members that catalyze data flows and promote novel data applications. As a large-scale data generator, … Our metabolomics platform delivers rich metabolite profiles from diverse biological and environmental samples by using …

… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … in cooperation to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New … 1000 Fungal Genomes Project on Mycocosm …

… focused on the fundamental science of animal and insect microbiomes, or on plant pathogens not associated with … of scope, as are marine-focused projects (more than 185 km from land). …