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Natural Prodcast Episode 21: Elizabeth Parkinson
… transcripts, and show notes with links to papers around the science we talked about, at natural prodcast dot com. So, … allow that to bind. Your receptor also typically has some tag so that you can then pull down the receptor with that …
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Plant Program
… current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing … grasses and fast-growing trees as renewable energy feedstocks. It also tackles challenges posed by … that are the most important to DOE mission and plant science. These species form the basis of plant research in …
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Partnerships: Adopt-A-Genome
… of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions … some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes …
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User Advisory Committees
… on JGI policies and practices that affect users and their science including technical capabilities offered, proposal … The DNA Synthesis Science Advisory Committee is chartered to offer advice, … management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back … of the problem, and then how machine learning, because it feeds on so much data, right, to learn features of interest. … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Natural Prodcast Episode 8: Eric Schmidt
… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey … in their environment and eating them. They’re filter feeders that have a really important role on the reef and … end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  …
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Sequencing Technologies & Products
… Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the JGI’s … efficiency and scalability. Read more about DAP-seq in this science feature. … uniquely offers quantitative Stable Isotope Probing (SIP) Metagenomics to the broader scientific community. The pipeline …
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Secondary Metabolites Program
… not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often … chat”-style podcast about natural products and the science and scientists of secondary metabolism. As the JGI …
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Natural Prodcast Episode 12: Nadine Ziemert
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of … got the podcast. If you have a question or want to give us feedback, tweet us at JGI or to me at Dan Udwary. That’s …
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Natural Prodcast Episode 11: Marnix Medema
… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Hey there, … the quantity is up to standard, and maybe it gives you some feedback as a developer. And then when it’s, well, when the … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …
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Data Ecosystem
… Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both … development of tools and infrastructure for microbiome data science, and the development of new informatics tools … ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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Primer and platform effects on 16S rRNA tag sequencing
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