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In honor of the JGI's 25th anniversary in 2022, we have revisited a … that will help solve energy and environmental challenges. Sorghum stands out as a candidate feedstock for biofuels … sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and increase its …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … N. N., Kelly W. J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat … E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 …

… our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …

… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … and using engineered biosynthetic pathways and enzyme systems to do synthetic analoging of some really complex … of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted to …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … to the community level. The Impact Rivers are transport systems, and their health is heavily reliant on the energy … and agriculture. Understanding the compositions of river microbiomes—who the core microbes are and what they do—can …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … we conducted an extensive internal product audit to analyze the scientific value, demand, and costs of current …

The JGI Project Management Office carries out a number of activities to facilitate … Investigator Providing a general orientation to JGI systems to Investigators Preparation of formal Statement of … has completed, your Project Manager will initiate analysis with the appropriate JGI analysis team. During this …

… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … biosynthetic gene clusters (BGCs), advancing pathway analysis, optimization of cell- and cell free-based … by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of …

Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … able to not only purchase their own HPLC to enable faster analysis of their plant extracts, but also establish their … identifying their roles within these complex communication systems across kingdoms of life. ALISON TAKEMURA: OK. This …