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Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence Berkeley National … I left that to join a biotech startup. And after that came to work with the JGI. And so now here at the JGI, I … tell.  ALISON: It could be bacterial blankets, or coats, or water bottles, in a metaphor…. DAN: Or because they’re …

It’s an evolution of primary metabolism. So a lot of the genes and the DNA that’s used for secondary metabolism, they … bacteria. He identified them as very small fungi. And this came from a growth on a cow’s cheek. Historically, before … weaken a cell wall, then the bacteria will just pop like a water balloon. But, you know, if you make modifications to …

P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A … thicker ice with younger, thinner ice means more fresh water — and less salt — near the surface where algae grow. …

… and we want to talk about molecular networking, because I really enjoyed the review that you wrote with Marnix … I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. Dan … I just kind of did a big circle of North America. So then I came back and I worked on an EU project, the Scottish …

… or metabolomics should apply to one of the JGI’s  calls for user proposals . … The JGI is inviting researchers using the … consumption by 20% within 10 years through increased efficiency and diversification of clean energy sources.  The … Centers are located in geographically distinct areas and use different plants both for laboratory research and for …

Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into … Constructs 5-10kb in size Single gene or multiple small genes assembled totaling 5-10kb in length, cloned into … ), binning 154/217 Metagenome Stable Isotope Probing (SIP) Used for the identification of active groups of organisms …

… those transcripts, so I hope somebody’s going to find them useful! DAN: Among many other things, Ben is maybe best … average, in comparison to the drug discovery from man-made campounds. So if you are interested in drug discovery, you … we have the first genome. So in 2000 genome sequence became available. That changes everything!  So, that leads me …

But one day, I decided to really be more aggressive. And I came down to Scripps Institution of Oceanography, which of … in chemistry with a hobby of putting your head underwater. But thankfully that worked out. And I spent 30, 40 … then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s …

Anyone using this system consents to monitoring of this use by system or security personnel. … With respect to … or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately owned rights. … Reference …

Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the … Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather proposals are submitted in …

… in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities … offered, proposal review procedures and the annual user meeting. The UEC also acts as a liaison to the user …

… that the Joint Genome Institute is a “Department of Energy user science facility”, and so today what you’re going to … RNA alongside. That really helps us to determine where genes start and end and really help improve our annotation. … related, and so we can do some projects that are freshwater and coastal. But we’ve kind of shied away from the …