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Natural Prodcast Episode 11: Marnix Medema
… over the last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, … then got funded to work for two years at the Max Planck for marine microbiology in Bremen, Germany. And I wanted to work … a nice example of going from a whole community with many microbes, hundreds of gene clusters, and then being able to …
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Natural Prodcast Episode 18: A CSP Primer
… areas that are less of a focus, I would say. For example, marine research is not so much of a focus within BER … where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a high … users, like when you set up a call, what are the most common questions that you get? Like, what are the things …
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Natural Prodcast Episode 1: The Primer, Part 1
… was adjacent to what I worked on, but my experience of how microbes are interacting in the environment like, like my … probably heard of the Salem Witch Trials back in the what? 15th, 16th century.  ALISON: Yeah, I lived in Massachusetts … because we do use them. And what this shows are all of the common biochemical pathways shared by almost all living …
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Natural Prodcast Episode 9: Roger Linington
Yeah, a lot of us start that way. ROGER:  Yeah, it’s a common track. DAN:  At least, the chemistry oriented people, … about the topic we cared about. And that gave us about 12,000 molecules. And that was enough for us to build a … accurate. And so we told people that if they would curate 1000 entries, that that would earn them authorship of the …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I was working on chemically … about 140 unique cyclic peptides. And from that, about 130 of them were not previously known. DAN: Very cool. … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …
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Natural Prodcast Episode 7: Ben Shen
… to convene, you know, people all over the word who have a common interest, united by natural products, DAN: You guys … Right, because they’re so reactive. BEN: …going back to the 1950s. But the structure of which was not known until the … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain …
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Marine Microbe Contains Multitudes
In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But … Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long … User Facility, is supported under contract number DE-AC02-05CH11231. This work is a contribution of the Simons …
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Metabolomics Program
… processes, development of high performance plants and microbes, and understanding microbiome interactions. The  … insights into how small molecules function within plants, microbes, and ecosystems. Identifying and analyzing primary … range of biological and environmental samples — including microbes, fungi, plants and soils. Through a combination of …
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Natural Prodcast Episode 2: The Primer, Part 2
… of secondary metabolites, like sponges were a really common source for people to try to find new medicines for a … we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … who was working on these things in the very early 1900s.  DAN: And so he has drawn what he called …
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The Fungi That Survive In Antarctica
Park, despite extremely harsh conditions. And their survival secrets could one day help other organisms survive …
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Examples: Successful LOIs & Submissions
… cryptoendolithic communities … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … … CSP Functional Genomics Submission … FICUS Example #1 … FICUS Example #2 …
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Publication Policy
… v/portal/lookup?keyName=proposalId&keyValue=XXXXXX&groupOnly=1&app=Info where XXXXXX is the WIP proposal ID. Example : … U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.” … All publications using JGI data produced … Molecular Sciences Laboratory ( https://ror.org/04rc0xn13 ), which are DOE Office of Science User Facilities …
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