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CSP Large Scale Call
… (BER) program missions .  While applications will be accepted that address any aspect of these mission areas, … of JGI technical and analytical capabilities. All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of the …
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Frequently Asked Questions: Project Management
… Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … including a downloadable pdf of products categorized by Science Program.  … the user community. Find out about JGI’s calls for proposals , and submit your proposal online using the Work Initiation Process (WIP) …
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Natural Prodcast Episode 23: Aaron Puri
… predict or just understand better the language of microbial cell-cell communication. And he told us about his work in … it! So, that’s this episode. I still have more stuff in the pipeline, including another recording made at SIMB, and any … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… for Ocean Sciences described a novel technique to access high-quality genomic information using minute … quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, …
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Industry Engagement Program
… that had remained largely unknown and underutilized by industry. When Director Nigel Mouncey joined the JGI in … Genesis Mission. Launched in 2025, the initiative aims to accelerate scientific discovery, strengthen national security … profiles from diverse biological and environmental samples by using advanced computer analysis coupled with …
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Natural Prodcast Episode 3: The Primer, Part 3
… a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about sponges, go pull … be successful. Right? Because we don’t – drugs are usually single molecules, they are not extracts. And so yeah, in … in ourselves and every living thing that we know of with cells, and so… So you can think of DNA as maybe being …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, … So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not …
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Natural Prodcast Episode 17: Cassandra Quave
… and culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. … and other natural product libraries, so not relying on single crystal X-ray diffraction, but looking actually at … mission to find new antibiotics and lifesaving treatments by seeking out healers and traditional medicines throughout …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … in how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based …
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Natural Prodcast Episode 1: The Primer, Part 1
… great conversations that we’ve already recorded with some excellent scientists, and that’s probably how we’ll continue … search away! If you like these primer episodes, let me know by emailing us to [email protected], or on twitter @JGI or … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… or online catalog, I guess. So we've also been able to get soils from Purdue campus itself and been able to actually … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY …
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