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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … ) integrates systems biology data and tools to help predict biological function.   To jointly support these missions, …
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CSP Large Scale Call
… call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal … For the CSP Large Scale call, a Letter of Intent (LOI) is required by the due date printed below. Proposals will be invited from those applicants …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also hosts the …
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Natural Prodcast Episode 16: Marcy Balunas
… Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … bobtail squid has two organs that solely house– whose sole function is to house bacterial associates. And so the one … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) … Previously, researchers had to apply to each facility with separate review schedules and selection processes, … provides customized analysis, the JGI also participates in publication of results. …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … and protein folding models, to improve the accuracy of functional predictions and speed up genome analysis. …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological mechanisms that enable fungi and algae to play a … strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy …
Learn more
User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials … interested in translating genomic information to biological function Investigators with research interests …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , JGI User …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … So that’s the fundamental aspects. And the second, from a biological potential application perspective, is because …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … of host-virus interactions, the exploration of the functional dark matter as well as the development of novel …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… for people, but also those molecules that mediate a well functioning ecosystem and environment and earth. So yeah, … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … a community effort of putting together the natural product structures that are known. I forget how many structures are …
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