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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , … You can visit the Products & Offerings section of our website for … The majority of JGI projects come from the user community. Find … The “User” signing the JGI User Agreement will be an authorized representative from your …
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Natural Prodcast Episode 8: Eric Schmidt
… his group that I would have to cut it, and so I came in the next day with it shaved off. Dedication. So.. DAN:  Yeah, I … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction …
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JGI-TMF Critical Minerals and Materials Call
… of critical minerals and materials. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … is no cost to the user and no granting of funds. All JGI data is made publicly available in accordance with the JGI’s … provides customized analysis, the JGI also participates in publication of results. Go here for a video and Q&A with …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours … 2,164 2,208 102.0% *Includes Illumina NovaSeq, Illumina NextSeq, Illumina MiSeq, and PacBio sequencing platforms. … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …
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FICUS Overview
… A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s … provides customized analysis, the JGI also participates in publication of results. …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. A primary …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … of carbon in the absence of oxygen. But these are the next step in the food web. So these are organisms– if you … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … really the same kind of thing. Before the age of genome sequencing, we had to basically break up the pieces of DNA … biosynthetic pathways are clustered, that the genes are next to one another. And that’s basically universal in …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … material is one of the greatest predictors of a successful sequencing project. It is imperative that users properly …
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Natural Prodcast Episode 11: Marnix Medema
… gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 … it also makes the data usable for people who want to do the next steps in science. Alison Takemura: And what does MIBiG … helpful, yes. And in that same sort of leapfrogging of data generation to data storage, now– well, behind the scenes, we …
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Homepage
…   Gain access to omics technologies generating community data at … Our homepage video includes external footage from: University of Delaware; Laura.Selbmann©PNRA. All the sampling … activities in Antarctica have been performed in the frame of italian expeditions of the Italian National Program for …
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