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… more economic, they also would like to extract some high– what they term “high value–“ Dan Udwary: Right. Kate … see everything, right? You can see the full biosynthetic potential of what you’ve got. Dan Udwary: You might not know … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples … of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … state-of-the-art data processing and analysis pipelines for the interpretation of microbiome omics data Developing … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … but in subtle ways that affect fitness. And so, doing a high level kind of analysis, you just might not be able to …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … research proposal.  Successful applications will focus on high-risk/high-payoff proposals within the focused topic … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… sparked your interest, and you want to learn more, then I highly recommend David Hopwood’s book called  “Streptomyces … it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … Right. Yeah. DAN: Alright, so a subset of proteins are enzymes. Enzymes are proteins that do chemical reactions. …

… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … two sequenced genomes of a Streptomyces , or gram-positive high GC organism.  Dan: Yeah, not a lot of natural product … might make this molecule and predicting what kind of enzymes might be involved, and then being able to make those …

For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … DAP-seq, and metabolomics. Submission Deadline Check back Spring 2026 for the FY27 call Check back Spring 2026 for the …

… and microbiology just followed me all the way through my high school days in England.  DAN: What did your dad do in … products work, right? Think about how many things that are potential drug molecules that have micromolar activities. … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … tools that enhance biofuel production and biosystem design. High-throughput design and synthesis capabilities accelerate … vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …