Search

Biology is currently experiencing a revolution brought on by rapid developments in … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Our lab is using mass spectrometry based metabolite profiling to provide … direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is … the distributed and dynamic metabolite networks of environmental microbes and how they transform their …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … stay there. And then, you know, they will have to create an environment that’s good for them to grow in. They might have … at different stages of growth or different signals from the environment might cause you to start producing things. …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… how unique they are, how they survive in this hypersaline environment, which can range from 8% to 28% salinity. We … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

The Facilities Integrating Collaborations for User Science (FICUS) initiative was … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … since 2012, with a focus on addressing critical energy and environmental challenges. Through innovative research in … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … (FICUS) initiative, Director’s Science (DS), Biological and Environmental Research Support Science (BERSS), or Bioenergy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… with school children and understanding the plants and their environment. We also were able to build a botanical garden, … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …

… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … to try and create an open source database of all known microbial natural products. So if you think about natural … scope of natural products diversity is likely to be in the environment? Can we use this broad-scale view of the …

… actinomycetes form spores and can reside in really tough environments kind of adds a fascination from a biological … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … things in the lab, we’re not growing them in their natural environment, we’re not subjecting them to the environmental … hasn’t been done in secondary metabolism before. And that drives the field forward.  DAN: So what we’re going to be …