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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … We’ll talk about that when we talk about molecular biology.  But um, yeah, so secondary metabolism is … it. All right, this is probably one of the most famous photographs in microbiology.    ALISON: Oh my gosh DAN: Do you …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that … of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the …
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CSP Large Scale Call
… is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities … review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … another one we recorded at the Society for Industrial Microbiology Natural Products conference that was held last … to have an index. You have to have the computer-searching systems. So one of the enabling technologies we wanted to do …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … the genes for and explore the chemistry of quorum sensing systems, specifically the acyl homoserine lactones.  If you … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … and an outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope … can turn on the natural product, say clusters or expression systems so that-- BETSY PARKINSON: Exactly. DAN: --you get …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … my hotel room at SIMB, or the Society for Industrial Microbiology conference that took place in January this year in … has gone on, the more we’ve become interested in sort of systems level approaches. So rather than asking one question …
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … work. And I think as we understand more about regulatory systems that will also help us predict which hosts might be … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … biology to ecosystem processes through model laboratory ecosystems. They are small plastic growth chambers where plants … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … (iSEE) and the Carl R. Woese Institute for Genomic Biology (IGB), and it will include 17 partner institutions. …
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