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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering … discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … as needed), and the work plan is written into a Statement of Work document. …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … those two groups and the ways in which they approached scientific problems. And so that sort of opened my eyes to … biology. In recent years, his group has turned to some software development in order to build the tools that they …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … Or genes that you can put a name into it, some sort of annotation, but they are not really well characterized. But, …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … Launched in 2025, the initiative aims to accelerate scientific discovery, strengthen national security and … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to … done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct … automations for DNA design, assembly and analysis Overview of biodesign products The JGI Biodesign platform enables …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse datasets … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … on sustaining our record of excellence and respect, and for principles of integrity, safety and reliability. As … and civility in all discussions and debate; Make decisions based on merit of issues; Act honestly, transparently, and …
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Sequencing Technologies & Products
… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the technologies and enabling state-of-the-art sample processing and sequencing capabilities. … high-throughput processing of samples in 96-well plates on automated liquid handler platforms, substantially increasing …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … is then sent to the JGI for genome sequencing, assembly and annotation. …
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User Support Analysis Group
… User Support Analysis group provides computational analysis for new technology development and JGI user science … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … accelerating discoveries and developing transformative bio-based technologies that address challenges in the sourcing, …
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