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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … great conversations that we’ve already recorded with some excellent scientists, and that’s probably how we’ll continue … ALISON: Hmm. It kind of – it’s kind of like I’m smelling bacterial perfume. I mean – but it’s purposeful so it’s some …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … to the 2-year use-restriction policy as described here. No single project has data under both use-restriction and …

… required documentation here .  … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This … ) Metagenomes and Single Cells: IMG/M   (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

… quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, …

The mission of the Joint Genome Institute is to serve the scientific community as a … the Letter of Intent; rather proposals are submitted in a single step. … The researcher then submits a proposal for … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… we want a chemist to study the ocean. And I didn’t find a single job advertisement. But one day, I decided to really … that the molecules out there would be toxic to cancer cells. And that started something big. Because at that time, … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and …

… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from … that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… about several different pieces of her work, including bacterial quorum sensing and its effects on regulation of … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY …

… been dominated for … well, as long as I can remember, by bacterial research.  So it was great to hear her passion and … parasite you really can’t grow well. You have to have it in cell culture. So we are going to see if we can express that … alone – I’m interested in pathogens. It’s just never a single microbe. And we have several recent papers and are …