Search

The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, …

… … DAN UDWARY: It’s been a while, but Natural Prodcast is back … algal genomes, a lot of effort goes into generating these data sets. There’s a lot of manual work in terms of the … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

The Facilities Integrating Collaborations for User Science … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

The JGI’s DNA Synthesis Program supports a wide range of projects, from … The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

… … Dan Udwary: You’re listening to the Department of Energy … center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade or …

DAN UDWARY: You’re listening to the Department of Energy … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … now, just because of the ways that we can generate data. So, obviously, it’s very apparent to us here at the …

Below is a brief description of the process needed to prepare and … GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or … emails as raw sequence data becomes available, and as analysis is completed. You can view the status of your …

… … DAN UDWARY: You’re listening to the Department of Energy … much I actually can learn just by really digging into the data and understanding what’s going on there. And now, … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

The Community Science Program Large Scale Call is focused on genomic science projects … for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …

Research in the Woyke laboratory focuses on the utility of … high value to establish models and hypotheses, experimental data is critical to further test such hypotheses. In … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The JGI leverages its existing partnerships and develops others providing … (e.g., the National Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology …

The Fungal & Algal Program explores the vast diversity of fungi and … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. … sampling of fungi, laboratory analysis and genomics data exploration. … The Mycocosm web portal provides data …