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… really happy today to be handing over our interview with Dr Elizabeth (or Betsy) Parkinson from Purdue … within the lab, we have both antibiotic assays for ESKAPE pathogens as well as anti cancer assays, and so we've … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …

… because I really enjoyed the review that you wrote with Marnix on putting that stuff together. It’s been kind … what’s important in terms of the chemistry produced by microbes. And by what’s important, I mean, like, where … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

… of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a … Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager …

… of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission areas of … newly-built Integrative Genomics Building (IGB), a home it shares with the staff of the DOE Systems Biology …

… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon and … work will NOT be considered under this program. Plant pathogens will only be considered if they are of relevance …

… clones if low number of variants, or pool of variants with sample sequencing to predict the number of successful … abundance of identified metabolites and unidentified features in spectra. 167/214 Metabolomics Non-polar … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …

… lucky to get some time to sit down and have a great chat with him.  I kind of lost count of how many times Brad used … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … systems. No one was, at that time, really working with microbes from the ocean. So I felt there was a wonderful …

… carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem … functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most efficient degraders of plant …

… to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — … from genomes, metagenomes, and metatranscriptomes. It features over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …

Uncovering associations between plant roots and fungi that can help or harm plant host … genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … but they’re not always immediately apparent. Similarly, the microbes found in plant roots may have unknown roles. Some …

… out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in … can cause all kinds of crazy havoc depending on what the drug wants to do. ALISON: Okay, so it’s for drug … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …

The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … of data science in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include …