Skip to main content
Logo
Logo Logo

Header Utility Nav

  • Mission
  • Science Programs
  • Who We Are
  • Data Policy & Support
  • Contact

Main navigation

  • Analyze Data
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • User Programs
      Learn more about our proposal calls
    • Offerings & Capabilities
      Learn how the JGI can advance your science
    • Industry Partnerships
      Opportunities for industry to access JGI resources
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Listen to our podcast to follow the science that the JGI supports
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Main navigation

  • Analyze Data
    • Menu
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • Menu
    • User Programs
      Learn more about our proposal calls
      • CSP Overview
      • FICUS Overview
      • Special Initiatives & Programs
    • Offerings & Capabilities
      Learn how the JGI can advance your science
      • Products
      • Sequencing
      • Biodesign
      • Metabolomics
    • Industry Partnerships
      Opportunities for industry to access JGI resources
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Menu
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Listen to our podcast to follow the science that the JGI supports
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Header Utility Nav

  • Mission
  • Science Programs
    • Menu
    • DNA Synthesis Program
    • Fungal & Algal Program
    • Metabolomics Program
    • Metagenome Program
    • Microbial Program
    • Plant Program
    • Secondary Metabolites Program
  • Who We Are
    • Menu
    • Leadership
    • Program & Platform Leads
      • Environmental Genomics
      • Metabolomics Technology
      • Micro-Scale Applications
      • Microbiome Data Science
      • New Lineages of Life
      • Plant Microbial Interactions
      • Single Cell Research
      • Strain Engineering
      • Synthetic Biology Informatics
      • Synthetic Biology Lab
      • User Support Analysis
      • Viral Genomics
    • Committees
      • JGI User Executive Committee
      • JGI Advisory Committee
      • DNA Synthesis Science User Advisory Committee
      • Fungal & Algal Program User Advisory Committee
      • Informatics Advisory Committee
      • Plant Program User Advisory Committee
      • Prokaryote Program User Advisory Committee
      • Secondary Metabolites Advisory Committee
  • Data Policy & Support
    • Menu
    • Project Management Office
    • Data Policy
  • Contact

Breadcrumb

  1. Home
  2. Search

Search

Results


Microbiome Data Science Team
… al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . … (2018) Programmed DNA destruction by miniature CRISPR-Cas14 enzymes. Science 362(6416):839-842. Duerkop BA, et al. … 8(1):1424. Sczyrba A, et al. (2017) Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics …
Learn more
DNA Synthesis Program
… Genome to Enzymes and Pathways focuses on discovering and characterizing enzymes and pathways vital to DOE missions. Using … biosynthesis, synthesizing and biochemically analyzing enzymes to support mission-driven research. Rapid Metabolic …
Learn more
Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… applied to DNA methylation analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & … How much DNA is needed for “regular” vs the ultra-low input library creation protocols for PacBio? A(nswer):  Regular … without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required for DNA …
Learn more
Natural Prodcast Episode 7: Ben Shen
… that everybody can read. So now, if you have, say, a huge library of books, with a unified language, but then you have … this information accessible, so everybody, readers of the library, can come to our databases and look for the specific … why the stereochemistry was that way. And he told me, it’s enzymes. It’s magic.  BEN:  Yeah, right.  DAN: I thought …
Learn more
Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
Learn more
Natural Prodcast Episode 5: Brad Moore
… might make this molecule and predicting what kind of enzymes might be involved, and then being able to make those … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes and genomes. We’re really hoping to – we’re …
Learn more
An Enzyme System to Help Catalyze Bioproduction of Plastic
… they need to grow and divide. Similar to the bacterial enzymes that fix nitrogen — nitrogenases — other enzymatic … has potential as an industrial workhorse. As these enzymes cleave the sulfur from gasses, they also produce … innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …
Learn more
Natural Prodcast Episode 16: Marcy Balunas
… it interacting with, like, a binding pocket for one of the enzymes, so something that’s metal dependent? Is it– and we …
Learn more
An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match characteristics — … process nutrients has a rich back story — they rely on enzymes that have been evolving for billions of years. … Facility located at Berkeley Lab. In addition to providing metagenome mining for computational analysis of the AT …
Learn more
Mining New Frontiers: The Critical Minerals and Materials Joint Call
… Could the proposal include snRNAseq and snATACseq library prep and sequencing? …
Learn more
Natural Prodcast Episode 2: The Primer, Part 2
Learn more
Natural Prodcast Episode 21: Elizabeth Parkinson
… But on the other hand, we're also really interested in enzymes to do some of the reactions that chemists find … very important in that peptidoglycan cross-linking. These enzymes show a lot of similarity to them in the primary … a really exciting part of this journey, is finding these enzymes that are capable of making those strange ring …
Learn more

Pagination

  • First page « First
  • Previous page ‹‹
  • Page 1
  • Page 2
  • Page 3
  • Page 4
  • Page 5
  • Page 6
  • Page 7
  • Page 8
  • Page 9
  • …
  • Next page ››
  • Last page Last »
Logo
  • LinkedIn
  • X
  • Bluesky
  • Youtube
Subscribe to our Newslettermail icon

JGI Footer

  • About
  • Contact
  • Careers
  • Media

Analyze Data Footer

  • Analyze Data
  • JGI Portals
  • Data Ecosystem
  • How to Use Our Systems

Work With Us Footer

  • Work With Us
  • User Programs
  • Offerings & Capabilities
  • Industry Partnerships
  • Educational Partnerships
  • Events

User Science Footer

  • User Stories
  • Science Stories
  • Genome Insider
  • Announcements
  • Publications
  • Approved Proposals
© 1997-2026 The Regents of the University of California

JGI Footer Utility

  • Disclaimer
  • Accessibility / Section 508 Statement
  • Archives
  • Site Feedback
Logo

Berkeley Footer

  • Contact
  • Visit Us
  • Subscribe
  • X
  • LinkedIn
  • Instagram
  • Facebook
  • Youtube
Logo
Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.

Berkeley Footer Utility

  • Staff Directory
  • For Employees
  • Emergency Status
  • Privacy & Security Notice
  • Site Feedback