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Partnerships: Adopt-A-Genome
… talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of … skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for …
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Natural Prodcast Episode 2: The Primer, Part 2
… Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … episode of Natural Prodcast, which continues a conversation from the first episode . You can go to part 3 here . You can …
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Natural Prodcast Episode 22: Alison Narayan
… we have our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this … of crossover, where us genome miners get really jazzed about finding enzymes that do unusual or unprecedented … to introduce our guest today, professor Alison Narayan from the University of Michigan. Dr. Narayan is currently …
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Natural Prodcast Episode 7: Ben Shen
… Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This … don’t really have any trouble understanding him, but I know from the download stats that we actually have a lot of …
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Viral Genomics Group
… of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these … to identify, filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. … Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature Biotech. …
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Fungal & Algal Program User Advisory Committee
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … potential applications. By recovering population genomes from metagenomes, we gain insights into microbial … qSIP quantifies incorporation of isotopes from labeled nutrients into biomass. When paired with …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class …
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Natural Prodcast Episode 18: A CSP Primer
… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the … science facility”, and so today what you’re going to hear about are some more of the details around that. Specifically, … since I started the podcast, I get lots of questions from scientists about whether and how they can work with the …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly … cycling and carbon storage. For example, the marine algae  Emiliania huxleyi, a microeukaryote, forms large … simultaneously, these genomic studies provide information about virus hosts. As a result, the outcomes of these studies …
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Natural Prodcast Episode 23: Aaron Puri
… of the day I’m due to release it, which is not ideal for me keeping myself on my self-imposed schedule. So, we’ll have … conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … with cool bacteria that I’m fascinated to learn more about. He works with methylotrophs, which are a group of …
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Micro-Scale Applications Group
… a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet … For further details, please reach out to the Group Lead …
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