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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … the University of Michigan and a really talented graduate student, Chad, he predicted that ancestors, that those … with that class of enzymes call themselves the non-heme team. JACKIE WINTER: Do they have shirts? ALISON NARAYAN: I …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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Who We Are
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence … Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative … in Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations …
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Natural Prodcast Episode 16: Marcy Balunas
… and I’m going to do it as an undergraduate and a graduate student then a postdoc and then a job.” Instead I got … is that we don’t know what all the biosynthetic gene clusters look like.  DAN: For sure.  MARCY: We have so much … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t …
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Natural Prodcast Episode 12: Nadine Ziemert
… during college or university, and I got this great job as a student assistant in the lab of Elke Dittmann, where I did … see a certain time span within these biosynthetic gene clusters. There’s gene fusion going on, and then I could see … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE …
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Natural Prodcast Episode 7: Ben Shen
… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … technology to help access complicated natural product gene clusters, and we’re all really excited about that, and I … straight to the cancer cells and the toxin can kill it. Teamwork!   If you’re somewhat knowledgeable in natural …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students … SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of … with computational biologist Dylan Chivian and other KBase team members at Lawrence Berkeley National Lab. …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the … with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory …
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Natural Prodcast Episode 5: Brad Moore
… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … how many different kinds of projects and how many great students have come out of your lab. And it feels like that’s … And then, hey, we found the first example of a gene cluster in a microalgae. There were four genes there. Not …
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Fungal & Algal Program
… the Fungal Tree of Life, from an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a … across fungi. Myco-Ed Genomics Initiative   engages students in environmental sampling of fungi, laboratory …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … and sequence and get the information on biosynthetic gene clusters. And I’ll explain all this. So but first, let’s … of this stuff. ALISON TAKEMURA: Yeah, and if I were a grad student or an early career scientist looking to get involved …
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