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Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … and PIs must provide an award number and contact information for their DOE program officer.  Submitters are … set, or the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …

… that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … why we want to do this. And also to provide a little more information and context for people who might possibly be … where this happened have a tendency to be susceptible to a fungal infection of rye grain – a specific fungus, Claviceps …

All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley … operations and scientific relevance and quality. … The Fungal & Algal Advisory Committee is chartered to offer … objectives for the JGI’s data science, informatics and information technology (IT) activities and strategic plan. … …

Machine learning methods were applied on sequenced fungal … 25  Dothideomycetes species, and also provides more information about speciation events. … The work conducted by …

… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … National Lab. You can find links to transcripts, more information on this episode and our other episodes at  …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … So I think the classical example yeah, is biofilm formation. So you’re producing different extra polymeric … bound to the transcription factors they’ll undergo a conformational change and go and sit down in the genome and …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** … target in Q2 is due to planned upgrade of the Laboratory Information Management System (LIMS) and temporary shut down …

… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … Daphnia pulex .  Science. 2011; 331: 555-561. Ohm RA et al. Formation of mushrooms and lignocellulose degradation …

… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … is no central open repository, which contains all of that information. In other words, we have invested an enormous … You would solve its structure by NMR. And when you had it clean, and you were pretty sure you knew what it was, you’d …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … in some cases where there’s very little even genomic information there, as well. So I think it’s a way to sort of …

Uncovering associations between plant roots and fungi that can help … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …