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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … we conducted an extensive internal product audit to analyze the scientific value, demand, and costs of current … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … and scientific research, especially at US National Labs, like Lawrence Berkeley Lab (that’s LBL), the National Lab … And I think also the quality that we provide. So for fungal and for a lot of our eukaryotic genomes, all our …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … in more detail. Especially if you want to look at the evolution of these gene clusters, for example, you really … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … for candidate bioenergy feedstock crops. Summary A plant is like an office building, its roots are akin to the ground …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … what we know is they’re quite selective in some way for antifungal activity. They are also, some of them, are … was episode 6.] about this. And really his focus was on the evolution of these systems and I understand you’ve worked on …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this whole “on-time … students, we obviously can't put any antibiotics or antifungals in there. So they get just a smattering. JACKIE: …
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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … hear about something I’ve been working on for what feels like forever, and we also recorded a proper introduction … So that’s– so that could be an example of convergent evolution, but just speculating there. But it’s interesting …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … single-cell genomics . Here, single cells are characterized and selected as based on a specific functional trait or … Biotechnol 35(8): 725-731 (2017). Woyke T . & Rubin E.M. Evolution. Searching for new branches on the tree of life. …
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