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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of … what led me to natural products. So after realizing that enzymes were specific for their substrates, that you …
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Mission
… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new strains, or enzymes to convert plant biomass components into fuels, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… of Natural Prodcast. A little bit of a bonus episode, since I’m off schedule, but this is an important one that … cool. The vanadium haloperoxidases are some really cool enzymes, and it was fun to see that project take shape. … not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley … operations and scientific relevance and quality. … The Fungal & Algal Advisory Committee is chartered to offer … Committee … DNA Synthesis Science User Advisory Committee … Fungal & Algal Program User Advisory Committee … Informatics …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … For example, the number of plant cell wall-degrading enzymes such as ligninases and cellulases were much lower in …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … them as very small fungi. And this came from a growth on a cow’s cheek. Historically, before antibiotics were common, … of weird growths on livestock due to you know, bacterial or fungal infections. Yeah, okay. So he identified these things …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … on the largest analysis of 5mC distribution across the fungal tree of life to date, involving more than 500 species … one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his … the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the DOE Joint Genome … major initiatives and more.  … BA/MS in Biophysics, Moscow Engineering Physics Institute, Moscow, Russia PhD in …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora … of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow them to efficiently break down … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match characteristics — … process nutrients has a rich back story — they rely on enzymes that have been evolving for billions of years. …
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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Frequently Asked Questions: Project Management
Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a … Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) … In general, data …
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