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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …
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Natural Prodcast Episode 3: The Primer, Part 3
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, … DAN: Well, it is and it isn’t. It depends on different systems of secondary metabolism and the things that are in … for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise of, I guess, …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with … for a long time about the evolution and natural products systems. This conversation came about because he challenged … could be a reasonable number if you are talking about a plant and a microbe interacting very stably. So it makes …
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Publication Policy
… to discuss authorship with JGI staff at their initiation meeting and again when analysis is delivered. … of publications and allowing connections between all systems to maximize the impact of user research. The crucial …
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JGI Portals
… Download plant, algal, fungal and microbial genomes and metagenomes — … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in … with functional annotation, taxonomic classification, and microbial host predictions.  …
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Natural Prodcast Episode 5: Brad Moore
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … wanted to be true to my roots, and always work with marine systems because that’s just where my innate curiosity and …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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Natural Prodcast Episode 2: The Primer, Part 2
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and … this time. Let’s jump right in. — DAN: So secondary metabolites. I kind of inferred through the stories I told … and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have …
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Who We Are
… collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome … through analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We …
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Project Management Office
… Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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Natural Prodcast Episode 4: Nancy Keller
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … ag[riculture] and I really liked – I became interested in plant disease in part because of what happened in my Peace … challenges were associated with getting good transformation systems going. That has a lot to do with, well, the fact …
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Natural Prodcast Episode 8: Eric Schmidt
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … high altitude! And a lot of us moved on to work in simpler systems, like bacteria, where we figure we can make more … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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